STRINGSTRING
icmF1 icmF1 impK impK impJ2 impJ2 impM impM BW43_00478 BW43_00478 BW43_00483 BW43_00483 impC2_1 impC2_1 impB2_1 impB2_1 impC2_2 impC2_2 impI impI BW43_00477 BW43_00477
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
icmF1Protein IcmF1. (1166 aa)    
Predicted Functional Partners:
impK
Protein ImpK.
 
 
 0.993
impJ2
Protein ImpJ.
 
 
 0.974
impM
Protein ImpM.
 
  
 0.969
BW43_00478
Putative phosphatase.
 
 
 0.947
BW43_00483
Putative lipoprotein.
 
  
 0.947
impC2_1
Protein ImpC.
 
 
 0.936
impB2_1
Protein ImpB.
 
 
 0.927
impC2_2
Protein ImpC.
 
 
 0.918
impI
Protein ImpI.
 
  
 0.917
BW43_00477
Putative serine/threonine protein kinase.
 
 
 0.914
Your Current Organism:
Pseudomonas sp. RIT357
NCBI taxonomy Id: 1470593
Other names: P. sp. RIT357
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